Index A | B | C | D | E | F | G | I | K | L | M | O | P | Q | R | S | T | U | V A add_source() (bionty.CellLine class method) (bionty.CellMarker class method) (bionty.CellType class method) (bionty.core.BioRecord class method) (bionty.DevelopmentalStage class method) (bionty.Disease class method) (bionty.Ethnicity class method) (bionty.ExperimentalFactor class method) (bionty.Gene class method) (bionty.Organism class method) (bionty.Pathway class method) (bionty.Phenotype class method) (bionty.Protein class method) (bionty.Tissue class method) add_synonym() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Tissue method) adelete() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Source method) (bionty.Tissue method) arefresh_from_db() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Source method) (bionty.Tissue method) artifacts (bionty.CellLine attribute) (bionty.CellMarker attribute) (bionty.CellType attribute) (bionty.DevelopmentalStage attribute) (bionty.Disease attribute) (bionty.Ethnicity attribute) (bionty.ExperimentalFactor attribute) (bionty.Gene attribute) (bionty.Organism attribute) (bionty.Pathway attribute) (bionty.Phenotype attribute) (bionty.Protein attribute) (bionty.Source attribute) (bionty.Tissue attribute) asave() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Source method) (bionty.Tissue method) B BFXPipeline (class in bionty.base) bionty module bionty.base module bionty.core module BioRecord (class in bionty.core) BioSample (class in bionty.base) C cell_markers (bionty.Organism attribute) CellLine (class in bionty) (class in bionty.base) CellMarker (class in bionty) (class in bionty.base) CellType (class in bionty) (class in bionty.base) children (bionty.CellLine attribute) (bionty.CellType attribute) (bionty.DevelopmentalStage attribute) (bionty.Disease attribute) (bionty.Ethnicity attribute) (bionty.ExperimentalFactor attribute) (bionty.Organism attribute) (bionty.Pathway attribute) (bionty.Phenotype attribute) (bionty.Tissue attribute) clean() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Source method) (bionty.Tissue method) clean_fields() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Source method) (bionty.Tissue method) create_relationship() (bionty.base.Ontology method) create_term() (bionty.base.Ontology method) created_by (bionty.CellLine attribute) (bionty.CellMarker attribute) (bionty.CellType attribute) (bionty.DevelopmentalStage attribute) (bionty.Disease attribute) (bionty.Ethnicity attribute) (bionty.ExperimentalFactor attribute) (bionty.Gene attribute) (bionty.Organism attribute) (bionty.Pathway attribute) (bionty.Phenotype attribute) (bionty.Protein attribute) (bionty.Source attribute) (bionty.Tissue attribute) created_by_id (bionty.CellLine attribute) (bionty.CellMarker attribute) (bionty.CellType attribute) (bionty.DevelopmentalStage attribute) (bionty.Disease attribute) (bionty.Ethnicity attribute) (bionty.ExperimentalFactor attribute) (bionty.Gene attribute) (bionty.Organism attribute) (bionty.Pathway attribute) (bionty.Phenotype attribute) (bionty.Protein attribute) (bionty.Source attribute) (bionty.Tissue attribute) D dataframe_artifact (bionty.Source attribute) dataframe_artifact_id (bionty.Source attribute) date_error_message() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Source method) (bionty.Tissue method) delete() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Source method) (bionty.Tissue method) DevelopmentalStage (class in bionty) (class in bionty.base) df() (bionty.base.BFXPipeline method) (bionty.base.BioSample method) (bionty.base.CellLine method) (bionty.base.CellMarker method) (bionty.base.CellType method) (bionty.base.DevelopmentalStage method) (bionty.base.Disease method) (bionty.base.Drug method) (bionty.base.Ethnicity method) (bionty.base.ExperimentalFactor method) (bionty.base.Gene method) (bionty.base.Organism method) (bionty.base.Pathway method) (bionty.base.Phenotype method) (bionty.base.Protein method) (bionty.base.PublicOntology method) (bionty.base.Tissue method) (bionty.core.StaticReference method) diff() (bionty.base.BFXPipeline method) (bionty.base.BioSample method) (bionty.base.CellLine method) (bionty.base.CellMarker method) (bionty.base.CellType method) (bionty.base.DevelopmentalStage method) (bionty.base.Disease method) (bionty.base.Drug method) (bionty.base.Ethnicity method) (bionty.base.ExperimentalFactor method) (bionty.base.Gene method) (bionty.base.Organism method) (bionty.base.Pathway method) (bionty.base.Phenotype method) (bionty.base.Protein method) (bionty.base.PublicOntology method) (bionty.base.Tissue method) (bionty.core.StaticReference method) Disease (class in bionty) (class in bionty.base) display_available_sources() (in module bionty.base) display_currently_used_sources() (in module bionty.base) DoesNotExist (bionty.CellLine attribute) (bionty.CellMarker attribute) (bionty.CellType attribute) (bionty.DevelopmentalStage attribute) (bionty.Disease attribute) (bionty.Ethnicity attribute) (bionty.ExperimentalFactor attribute) (bionty.Gene attribute) (bionty.Organism attribute) (bionty.Pathway attribute) (bionty.Phenotype attribute) (bionty.Protein attribute) (bionty.Source attribute) (bionty.Tissue attribute) Drug (class in bionty.base) dump() (bionty.base.Ontology method) dumps() (bionty.base.Ontology method) E Ethnicity (class in bionty) (class in bionty.base) ExperimentalFactor (class in bionty) (class in bionty.base) F feature_sets (bionty.CellMarker attribute) (bionty.Gene attribute) (bionty.Pathway attribute) (bionty.Protein attribute) fields (bionty.base.BFXPipeline property) (bionty.base.BioSample property) (bionty.base.CellLine property) (bionty.base.CellMarker property) (bionty.base.CellType property) (bionty.base.DevelopmentalStage property) (bionty.base.Disease property) (bionty.base.Drug property) (bionty.base.Ethnicity property) (bionty.base.ExperimentalFactor property) (bionty.base.Gene property) (bionty.base.Organism property) (bionty.base.Pathway property) (bionty.base.Phenotype property) (bionty.base.Protein property) (bionty.base.PublicOntology property) (bionty.base.Tissue property) (bionty.core.StaticReference property) from_obo_library() (bionty.base.Ontology class method) from_source() (bionty.CellLine class method) (bionty.CellMarker class method) (bionty.CellType class method) (bionty.core.BioRecord class method) (bionty.DevelopmentalStage class method) (bionty.Disease class method) (bionty.Ethnicity class method) (bionty.ExperimentalFactor class method) (bionty.Gene class method) (bionty.Organism class method) (bionty.Pathway class method) (bionty.Phenotype class method) (bionty.Protein class method) (bionty.Tissue class method) from_values() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Tissue method) G Gene (class in bionty) (class in bionty.base) genes (bionty.Organism attribute) (bionty.Pathway attribute) get() (bionty.base.Ontology method) get_constraints() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Source method) (bionty.Tissue method) get_deferred_fields() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Source method) (bionty.Tissue method) get_relationship() (bionty.base.Ontology method) get_synonym_type() (bionty.base.Ontology method) get_term() (bionty.base.Ontology method) I import_source() (bionty.CellLine class method) (bionty.CellMarker class method) (bionty.CellType class method) (bionty.core.BioRecord class method) (bionty.DevelopmentalStage class method) (bionty.Disease class method) (bionty.Ethnicity class method) (bionty.ExperimentalFactor class method) (bionty.Gene class method) (bionty.Organism class method) (bionty.Pathway class method) (bionty.Phenotype class method) (bionty.Protein class method) (bionty.Tissue class method) inspect() (bionty.base.BFXPipeline method) (bionty.base.BioSample method) (bionty.base.CellLine method) (bionty.base.CellMarker method) (bionty.base.CellType method) (bionty.base.DevelopmentalStage method) (bionty.base.Disease method) (bionty.base.Drug method) (bionty.base.Ethnicity method) (bionty.base.ExperimentalFactor method) (bionty.base.Gene method) (bionty.base.Organism method) (bionty.base.Pathway method) (bionty.base.Phenotype method) (bionty.base.Protein method) (bionty.base.PublicOntology method) (bionty.base.Tissue method) (bionty.CellLine class method) (bionty.CellMarker class method) (bionty.CellType class method) (bionty.core.BioRecord class method) (bionty.core.StaticReference method) (bionty.DevelopmentalStage class method) (bionty.Disease class method) (bionty.Ethnicity class method) (bionty.ExperimentalFactor class method) (bionty.Gene class method) (bionty.Organism class method) (bionty.Pathway class method) (bionty.Phenotype class method) (bionty.Protein class method) (bionty.Tissue class method) items() (bionty.base.Ontology method) K keys() (bionty.base.Ontology method) L links_artifact (bionty.CellLine attribute) (bionty.CellMarker attribute) (bionty.CellType attribute) (bionty.DevelopmentalStage attribute) (bionty.Disease attribute) (bionty.Ethnicity attribute) (bionty.ExperimentalFactor attribute) (bionty.Gene attribute) (bionty.Organism attribute) (bionty.Pathway attribute) (bionty.Phenotype attribute) (bionty.Protein attribute) (bionty.Tissue attribute) lookup() (bionty.base.BFXPipeline method) (bionty.base.BioSample method) (bionty.base.CellLine method) (bionty.base.CellMarker method) (bionty.base.CellType method) (bionty.base.DevelopmentalStage method) (bionty.base.Disease method) (bionty.base.Drug method) (bionty.base.Ethnicity method) (bionty.base.ExperimentalFactor method) (bionty.base.Gene method) (bionty.base.Organism method) (bionty.base.Pathway method) (bionty.base.Phenotype method) (bionty.base.Protein method) (bionty.base.PublicOntology method) (bionty.base.Tissue method) (bionty.core.StaticReference method) M map_legacy_ids() (bionty.base.Gene method) map_synonyms() (bionty.base.BFXPipeline method) (bionty.base.BioSample method) (bionty.base.CellLine method) (bionty.base.CellMarker method) (bionty.base.CellType method) (bionty.base.DevelopmentalStage method) (bionty.base.Disease method) (bionty.base.Drug method) (bionty.base.Ethnicity method) (bionty.base.ExperimentalFactor method) (bionty.base.Gene method) (bionty.base.Organism method) (bionty.base.Pathway method) (bionty.base.Phenotype method) (bionty.base.Protein method) (bionty.base.PublicOntology method) (bionty.base.Tissue method) (bionty.core.StaticReference method) Meta (bionty.CellLine attribute) (bionty.CellMarker attribute) (bionty.CellType attribute) (bionty.core.BioRecord attribute) (bionty.DevelopmentalStage attribute) (bionty.Disease attribute) (bionty.Ethnicity attribute) (bionty.ExperimentalFactor attribute) (bionty.Gene attribute) (bionty.Organism attribute) (bionty.Pathway attribute) (bionty.Phenotype attribute) (bionty.Protein attribute) (bionty.Source attribute) (bionty.Tissue attribute) module bionty bionty.base bionty.core MultipleObjectsReturned (bionty.CellLine attribute) (bionty.CellMarker attribute) (bionty.CellType attribute) (bionty.DevelopmentalStage attribute) (bionty.Disease attribute) (bionty.Ethnicity attribute) (bionty.ExperimentalFactor attribute) (bionty.Gene attribute) (bionty.Organism attribute) (bionty.Pathway attribute) (bionty.Phenotype attribute) (bionty.Protein attribute) (bionty.Source attribute) (bionty.Tissue attribute) O objects (bionty.CellLine attribute) (bionty.CellMarker attribute) (bionty.CellType attribute) (bionty.DevelopmentalStage attribute) (bionty.Disease attribute) (bionty.Ethnicity attribute) (bionty.ExperimentalFactor attribute) (bionty.Gene attribute) (bionty.Organism attribute) (bionty.Pathway attribute) (bionty.Phenotype attribute) (bionty.Protein attribute) (bionty.Source attribute) (bionty.Tissue attribute) Ontology (class in bionty.base) organism (bionty.base.BFXPipeline property) (bionty.base.BioSample property) (bionty.base.CellLine property) (bionty.base.CellMarker property) (bionty.base.CellType property) (bionty.base.DevelopmentalStage property) (bionty.base.Disease property) (bionty.base.Drug property) (bionty.base.Ethnicity property) (bionty.base.ExperimentalFactor property) (bionty.base.Gene property) (bionty.base.Organism property) (bionty.base.Pathway property) (bionty.base.Phenotype property) (bionty.base.Protein property) (bionty.base.PublicOntology property) (bionty.base.Tissue property) (bionty.CellMarker attribute) (bionty.core.Settings property) (bionty.core.StaticReference property) (bionty.Gene attribute) (bionty.Protein attribute) Organism (class in bionty) (class in bionty.base) organism_id (bionty.CellMarker attribute) (bionty.Gene attribute) (bionty.Protein attribute) P parents (bionty.CellLine attribute) (bionty.CellType attribute) (bionty.DevelopmentalStage attribute) (bionty.Disease attribute) (bionty.Ethnicity attribute) (bionty.ExperimentalFactor attribute) (bionty.Organism attribute) (bionty.Pathway attribute) (bionty.Phenotype attribute) (bionty.Tissue attribute) Pathway (class in bionty) (class in bionty.base) pathways (bionty.Gene attribute) Phenotype (class in bionty) (class in bionty.base) pk (bionty.CellLine property) (bionty.CellMarker property) (bionty.CellType property) (bionty.core.BioRecord property) (bionty.DevelopmentalStage property) (bionty.Disease property) (bionty.Ethnicity property) (bionty.ExperimentalFactor property) (bionty.Gene property) (bionty.Organism property) (bionty.Pathway property) (bionty.Phenotype property) (bionty.Protein property) (bionty.Source property) (bionty.Tissue property) prepare_database_save() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Source method) (bionty.Tissue method) Protein (class in bionty) (class in bionty.base) proteins (bionty.Organism attribute) public() (bionty.CellLine class method) (bionty.CellMarker class method) (bionty.CellType class method) (bionty.core.BioRecord class method) (bionty.DevelopmentalStage class method) (bionty.Disease class method) (bionty.Ethnicity class method) (bionty.ExperimentalFactor class method) (bionty.Gene class method) (bionty.Organism class method) (bionty.Pathway class method) (bionty.Phenotype class method) (bionty.Protein class method) (bionty.Tissue class method) PublicOntology (class in bionty.base) PublicOntologyField (class in bionty.base) Q query_children() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Tissue method) query_parents() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Tissue method) R refresh_from_db() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Source method) (bionty.Tissue method) relationships() (bionty.base.Ontology method) remove_synonym() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Tissue method) reset_sources() (in module bionty.base) run (bionty.CellLine attribute) (bionty.CellMarker attribute) (bionty.CellType attribute) (bionty.DevelopmentalStage attribute) (bionty.Disease attribute) (bionty.Ethnicity attribute) (bionty.ExperimentalFactor attribute) (bionty.Gene attribute) (bionty.Organism attribute) (bionty.Pathway attribute) (bionty.Phenotype attribute) (bionty.Protein attribute) (bionty.Source attribute) (bionty.Tissue attribute) run_id (bionty.CellLine attribute) (bionty.CellMarker attribute) (bionty.CellType attribute) (bionty.DevelopmentalStage attribute) (bionty.Disease attribute) (bionty.Ethnicity attribute) (bionty.ExperimentalFactor attribute) (bionty.Gene attribute) (bionty.Organism attribute) (bionty.Pathway attribute) (bionty.Phenotype attribute) (bionty.Protein attribute) (bionty.Source attribute) (bionty.Tissue attribute) S save() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Source method) (bionty.Tissue method) save_base() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Source method) (bionty.Tissue method) search() (bionty.base.BFXPipeline method) (bionty.base.BioSample method) (bionty.base.CellLine method) (bionty.base.CellMarker method) (bionty.base.CellType method) (bionty.base.DevelopmentalStage method) (bionty.base.Disease method) (bionty.base.Drug method) (bionty.base.Ethnicity method) (bionty.base.ExperimentalFactor method) (bionty.base.Gene method) (bionty.base.Organism method) (bionty.base.Pathway method) (bionty.base.Phenotype method) (bionty.base.Protein method) (bionty.base.PublicOntology method) (bionty.base.Tissue method) (bionty.core.StaticReference method) serializable_value() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Source method) (bionty.Tissue method) set_abbr() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Tissue method) set_as_currently_used() (bionty.Source method) set_latest_sources_as_currently_used() (in module bionty.core) Settings (class in bionty.core) settings (in module bionty) (in module bionty.base) source (bionty.base.BFXPipeline property) (bionty.base.BioSample property) (bionty.base.CellLine property) (bionty.base.CellMarker property) (bionty.base.CellType property) (bionty.base.DevelopmentalStage property) (bionty.base.Disease property) (bionty.base.Drug property) (bionty.base.Ethnicity property) (bionty.base.ExperimentalFactor property) (bionty.base.Gene property) (bionty.base.Organism property) (bionty.base.Pathway property) (bionty.base.Phenotype property) (bionty.base.Protein property) (bionty.base.PublicOntology property) (bionty.base.Tissue property) (bionty.CellLine attribute) (bionty.CellMarker attribute) (bionty.CellType attribute) (bionty.core.BioRecord attribute) (bionty.core.StaticReference property) (bionty.DevelopmentalStage attribute) (bionty.Disease attribute) (bionty.Ethnicity attribute) (bionty.ExperimentalFactor attribute) (bionty.Gene attribute) (bionty.Organism attribute) (bionty.Pathway attribute) (bionty.Phenotype attribute) (bionty.Protein attribute) (bionty.Tissue attribute) Source (class in bionty) source_id (bionty.CellLine attribute) (bionty.CellMarker attribute) (bionty.CellType attribute) (bionty.core.BioRecord attribute) (bionty.DevelopmentalStage attribute) (bionty.Disease attribute) (bionty.Ethnicity attribute) (bionty.ExperimentalFactor attribute) (bionty.Gene attribute) (bionty.Organism attribute) (bionty.Pathway attribute) (bionty.Phenotype attribute) (bionty.Protein attribute) (bionty.Tissue attribute) standardize() (bionty.base.BFXPipeline method) (bionty.base.BioSample method) (bionty.base.CellLine method) (bionty.base.CellMarker method) (bionty.base.CellType method) (bionty.base.DevelopmentalStage method) (bionty.base.Disease method) (bionty.base.Drug method) (bionty.base.Ethnicity method) (bionty.base.ExperimentalFactor method) (bionty.base.Gene method) (bionty.base.Organism method) (bionty.base.Pathway method) (bionty.base.Phenotype method) (bionty.base.Protein method) (bionty.base.PublicOntology method) (bionty.base.Tissue method) (bionty.CellLine class method) (bionty.CellMarker class method) (bionty.CellType class method) (bionty.core.BioRecord class method) (bionty.core.StaticReference method) (bionty.DevelopmentalStage class method) (bionty.Disease class method) (bionty.Ethnicity class method) (bionty.ExperimentalFactor class method) (bionty.Gene class method) (bionty.Organism class method) (bionty.Pathway class method) (bionty.Phenotype class method) (bionty.Protein class method) (bionty.Tissue class method) StaticReference (class in bionty.core) sync_all_sources_to_latest() (in module bionty.core) synonym_types() (bionty.base.Ontology method) T terms() (bionty.base.Ontology method) Tissue (class in bionty) (class in bionty.base) to_df() (bionty.base.Ontology method) to_pronto() (bionty.base.BFXPipeline method) (bionty.base.BioSample method) (bionty.base.CellLine method) (bionty.base.CellMarker method) (bionty.base.CellType method) (bionty.base.DevelopmentalStage method) (bionty.base.Disease method) (bionty.base.Drug method) (bionty.base.Ethnicity method) (bionty.base.ExperimentalFactor method) (bionty.base.Gene method) (bionty.base.Organism method) (bionty.base.Pathway method) (bionty.base.Phenotype method) (bionty.base.Protein method) (bionty.base.PublicOntology method) (bionty.base.Tissue method) (bionty.core.StaticReference method) U unique_error_message() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Source method) (bionty.Tissue method) V validate() (bionty.base.BFXPipeline method) (bionty.base.BioSample method) (bionty.base.CellLine method) (bionty.base.CellMarker method) (bionty.base.CellType method) (bionty.base.DevelopmentalStage method) (bionty.base.Disease method) (bionty.base.Drug method) (bionty.base.Ethnicity method) (bionty.base.ExperimentalFactor method) (bionty.base.Gene method) (bionty.base.Organism method) (bionty.base.Pathway method) (bionty.base.Phenotype method) (bionty.base.Protein method) (bionty.base.PublicOntology method) (bionty.base.Tissue method) (bionty.CellLine class method) (bionty.CellMarker class method) (bionty.CellType class method) (bionty.core.BioRecord class method) (bionty.core.StaticReference method) (bionty.DevelopmentalStage class method) (bionty.Disease class method) (bionty.Ethnicity class method) (bionty.ExperimentalFactor class method) (bionty.Gene class method) (bionty.Organism class method) (bionty.Pathway class method) (bionty.Phenotype class method) (bionty.Protein class method) (bionty.Tissue class method) validate_constraints() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Source method) (bionty.Tissue method) validate_unique() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Source method) (bionty.Tissue method) values() (bionty.base.Ontology method) version (bionty.base.BFXPipeline property) (bionty.base.BioSample property) (bionty.base.CellLine property) (bionty.base.CellMarker property) (bionty.base.CellType property) (bionty.base.DevelopmentalStage property) (bionty.base.Disease property) (bionty.base.Drug property) (bionty.base.Ethnicity property) (bionty.base.ExperimentalFactor property) (bionty.base.Gene property) (bionty.base.Organism property) (bionty.base.Pathway property) (bionty.base.Phenotype property) (bionty.base.Protein property) (bionty.base.PublicOntology property) (bionty.base.Tissue property) (bionty.core.StaticReference property) view_parents() (bionty.CellLine method) (bionty.CellMarker method) (bionty.CellType method) (bionty.core.BioRecord method) (bionty.DevelopmentalStage method) (bionty.Disease method) (bionty.Ethnicity method) (bionty.ExperimentalFactor method) (bionty.Gene method) (bionty.Organism method) (bionty.Pathway method) (bionty.Phenotype method) (bionty.Protein method) (bionty.Tissue method)